Generate a model and run it
setup_model()
Set up a model
setup_test_model()
FUNCTION_TITLE
run_model()
Run a model
Manipulate details of agent and network creation, and running.
build_agent_df()
Create one or more agents
tick()
Advance model by one tick
infect()
Propagate infections on the network
progress_disease()
Progress agents in the "E" and "I" compartments to the next compartments ("I" and "R", respectively).
Access details of model parameters
decode_age_bracket()
Translate text representation of an age bracket into an ordered factor
decode_seir()
Translate integer index to SEIR level
get_age_bracket()
Get the age bracket
get_seir_level()
Translate a letter into an integer SEIR level
transition_prob()
Look up a progression probability to the next compartment
Create parameter sets or read them from disk.
generate_agent_params()
Build a list of parameters for constructing agents